In order to take advantage of the higher output capability of the Dyna coil you must increase the gap to the plugs maximum range. I think once you do that all will be OK. Make sure the side electrode is square with the center electrode and extends to the edge of the center electrode,sometimes it takes a little fiddling to get it proper.So, better to have at 9mm for Dyna coils, Higgy?
As far as the plug wires go direction does not matter as long as they make good contact at both ends. Polarity of the coils matters,check it when you get home.
Check out the manufacturer's website to find the maximum range of the plugs you have installed. Going beyond their recommended range of gap changes the heat range of the plug, not something you want to do with a Ducati.
and.....
have a safe trip Warwick